EGAF00004828170 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828170
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22262714
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	70541	0.3168571450902168	No Hit
CCCAAATCTTTAAACCGATGAGCAACCTCACTCTTGTGTGCATCTCGACG	35357	0.1588171145710267	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	29783	0.1337797359297703	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	28838	0.12953497044430434	No Hit
CTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTA	27005	0.12130147294709889	No Hit
CTCTTTTGTTGCCTTGGGCTTGTGTTTCACGAGCTCAACAAGTGCAGTTT	25415	0.11415948657472759	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	24463	0.10988327838196187	No Hit
CCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAGACCTC	22291	0.10012705548838295	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCGA	5720	31.948328	4
CCCGTAT	6560	31.20387	1
ACCCGGG	47695	29.901415	145
CGTATCG	9415	29.061632	3
GAACTCT	57005	27.139032	9
CTTAACG	16815	26.24253	3
CCGTATC	10350	26.085644	2
TTGAACT	66520	24.04208	7
CCTCTTG	58460	24.022661	3
CTTGAAC	64930	23.80458	6
CTCTTGA	61310	23.596914	4
TTAACGG	18765	23.573547	4
AACGGTT	18505	23.506117	6
TAACGGT	19015	23.183588	5
GCCCTCT	51000	22.877941	1
TCTTGAA	66890	22.437916	5
CCCTCTT	57800	22.049345	2
TATCGAA	9070	21.903658	5
TCTTAAC	21680	20.654984	2
ACCCGTT	9745	20.406462	2