FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004828185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004828185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8600797
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA276820.3218538933077946No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA118410.13767328771973109No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC92170.10716448719810502No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)