EGAF00004828268 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828268
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7377553
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	19494	0.26423395399531524	No Hit
CGCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCT	14899	0.20195042990541712	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	13758	0.18648459726416064	No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG	12047	0.16329262561719313	No Hit
CGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGG	11365	0.15404836807000913	No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	10704	0.14508875774935132	No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA	10572	0.14329954661118666	No Hit
CTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACTATTCCTC	8955	0.12138171016866975	No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA	7920	0.10735266828987876	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCGT	1320	52.772797	1
GCGATTT	2395	43.08036	94
ACCGTTG	1630	42.456238	3
CGCAAAA	3975	41.35794	1
GACCGTT	1710	39.927303	2
TAACCCC	4310	37.28261	9
ACCCGGC	3035	36.882126	5
CCGTTGA	2060	33.59607	4
TTAACCC	4955	32.335968	8
CACCCGG	3605	31.309088	4
TCACCCG	3785	30.309162	3
CCGTATG	2820	28.82427	4
CGCGGGT	3940	28.641962	1
GCGGGTC	3945	28.609354	2
CGGCCCG	4055	27.716278	8
ACCGTAT	2980	27.274992	3
CTACCGT	3200	25.977407	1
ATCACAT	4435	25.968733	1
GTCGTAA	720	25.803886	5
CGTATGG	3175	25.746994	5