Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828388 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14320335 |
Total Bases | 85.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 33 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ACTTGA | 14029050 | 97.96593445614226 | No Hit |
NCTTGA | 59219 | 0.4135308287131551 | No Hit |
ACTTGC | 45238 | 0.3159004311002501 | No Hit |
ATTTGA | 19433 | 0.13570213266658915 | No Hit |
ACTTTA | 19303 | 0.13479433267448004 | No Hit |
ACTTCA | 18578 | 0.12973160194925606 | No Hit |
CCTTGA | 17341 | 0.12109353587049464 | No Hit |
ACTTAA | 16007 | 0.11177811133608256 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)