Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828397 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16533944 |
Total Bases | 99.2 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 33 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TAGCTT | 16138990 | 97.61125355208654 | No Hit |
NAGCTT | 67805 | 0.4100957400121834 | No Hit |
TAGCTA | 36924 | 0.22332239664051118 | No Hit |
TAGCTC | 35379 | 0.21397798371640792 | No Hit |
TAGTTT | 32911 | 0.19905111569266232 | No Hit |
TAGCCT | 31134 | 0.1883035287890173 | No Hit |
TATCTT | 31044 | 0.1877591940555744 | No Hit |
TAACTT | 25398 | 0.1536112617775892 | No Hit |
TAGCAT | 18589 | 0.1124293151107806 | No Hit |
TAGATT | 17799 | 0.10765126578389282 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)