Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828400 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16486602 |
Total Bases | 98.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 33 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TAGCTT | 16063499 | 97.43365552222343 | No Hit |
NAGCTT | 101084 | 0.6131281630987392 | No Hit |
TAGCTA | 37055 | 0.22475826128392015 | No Hit |
TAGCTC | 35511 | 0.2153930809999538 | No Hit |
TAGTTT | 32515 | 0.197220749309045 | No Hit |
TAGCCT | 30699 | 0.18620574451909494 | No Hit |
TATCTT | 30189 | 0.18311232357037552 | No Hit |
TAACTT | 24495 | 0.14857518850761364 | No Hit |
TAGCAT | 18324 | 0.11114479502810828 | No Hit |
TAGATT | 17333 | 0.10513385353755735 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)