EGAF00004828405 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828405
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11089767
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	41006	0.3697643061391641	No Hit
GTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGT	34713	0.31301829876137166	No Hit
GTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCA	23430	0.2112758545783694	No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG	22575	0.20356604426404992	No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA	21711	0.19577507805168493	No Hit
CGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAAC	21015	0.18949902193616872	No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA	19466	0.1755311901503431	No Hit
TGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAG	18290	0.1649268194724019	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	17896	0.1613739946024114	No Hit
GGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGTCGGG	16363	0.1475504399686666	No Hit
GAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGTCG	13912	0.12544898373428404	No Hit
CGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAAC	13799	0.12443002634771316	No Hit
GCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAACTAACCAGGATT	13274	0.11969593229506084	No Hit
TGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGTC	13006	0.1172792899977069	No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC	11404	0.10283354014561352	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTAAC	4545	56.162388	1
TCACCCG	9120	50.030613	3
CACCCGG	9675	47.20921	4
ACCCGGC	11030	41.452503	5
GCGATTT	10030	39.213005	94
ACGTGCG	7015	36.37157	8
AACACGT	7310	35.805626	5
TAACACG	7340	35.5951	4
CGACCGT	1120	35.321682	1
TCAGACG	4785	35.235245	2
CCAGTAG	6375	34.791668	5
CTCACCC	13750	33.703003	2
ACACGTG	7885	32.896435	6
TAGCATA	7025	32.57411	9
TCTAACA	8080	32.523632	2
GTAGCAT	7120	32.007492	8
CAGTAGC	7250	31.24068	6
GCCAGTA	7210	31.153301	4
CATTCGG	2615	31.087505	4
CACGTGC	8710	29.780125	7