Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828487 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13996891 |
Total Bases | 83.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCCAAT | 13680873 | 97.74222718459407 | No Hit |
NCCAAT | 73819 | 0.5273956909430816 | No Hit |
ACCAAT | 26839 | 0.19174972499250012 | No Hit |
GCTAAT | 25567 | 0.18266199258106675 | No Hit |
GCCAAA | 24324 | 0.17378144903750412 | No Hit |
GCCACT | 24171 | 0.172688349148393 | No Hit |
GTCAAT | 22150 | 0.1582494283909191 | No Hit |
GCCCAT | 18506 | 0.13221507547640401 | No Hit |
TCCAAT | 18000 | 0.12859998695424577 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)