Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828496 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14289465 |
Total Bases | 85.7 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 33 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTGTA | 14007336 | 98.02561537468337 | No Hit |
NTTGTA | 75728 | 0.5299568598264526 | No Hit |
CTTGTC | 25833 | 0.18078353528281152 | No Hit |
TTTGTA | 16489 | 0.11539270364565783 | No Hit |
CTTTTA | 15674 | 0.10968920110025113 | No Hit |
ATTGTA | 14765 | 0.10332787126739874 | No Hit |
CATGTA | 14515 | 0.10157833060929852 | No Hit |
CTTGAA | 14321 | 0.10022068705861276 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)