Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828550 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12002190 |
Total Bases | 72 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 33 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TAGCTT | 11731280 | 97.74282860044708 | No Hit |
NAGCTT | 63648 | 0.5303032196624117 | No Hit |
TAGCTA | 23823 | 0.19848877579841678 | No Hit |
TAGTTT | 22412 | 0.18673258796936226 | No Hit |
TAGCTC | 19577 | 0.16311189874514567 | No Hit |
TATCTT | 19536 | 0.1627702944212681 | No Hit |
TAGCCT | 19425 | 0.16184546320296547 | No Hit |
TAACTT | 17197 | 0.14328218433469225 | No Hit |
TAGCAT | 12603 | 0.10500583643485065 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)