Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828571 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14081941 |
Total Bases | 84.4 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 83 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTGGCC | 13756480 | 97.68880582584461 | No Hit |
NTGGCC | 68275 | 0.4848408326664627 | No Hit |
GTGGCT | 53939 | 0.38303668507061633 | No Hit |
GTGGTC | 22651 | 0.16085140535669054 | No Hit |
GTTGCC | 21952 | 0.15588760100613971 | No Hit |
GTGTCC | 21521 | 0.1528269433879889 | No Hit |
TTGGCC | 18427 | 0.13085554044005723 | No Hit |
ATGGCC | 15126 | 0.10741416968015986 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)