EGAF00004828621 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828621
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12671592
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAAC	22365	0.17649715994643767	No Hit
GTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCA	19639	0.1549844723535922	No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC	18997	0.1499180213504349	No Hit
CGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAAC	16968	0.13390582651335364	No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT	13584	0.10720042122568339	No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	13258	0.10462773738295866	No Hit
GCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAACTAACCAGGATT	13230	0.10440677067254059	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCGT	1320	54.916702	1
GTCTAAC	4410	46.751244	1
ACCGTTG	1870	39.703304	3
GTAATCG	945	36.29963	3
GCGATTT	3520	35.77794	94
TAACACG	5725	35.704666	4
GACCGTT	2065	35.332085	2
ACGTGCG	5850	34.779858	8
TCGCATA	885	33.98098	7
AACACGT	6195	33.299244	5
GTCGTAA	1110	30.903742	5
CGTGCGC	6690	30.482994	9
TCAGACG	5110	30.398396	2
CCGTTGA	2480	29.558617	4
GTGGCGA	13860	29.24136	2
TCACCCG	4805	28.751806	3
ACACGTG	7395	27.895718	6
TGGCGAC	14625	27.857004	3
TCGTAAG	1290	27.684397	6
CCGTCAT	6860	27.584148	1