Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828748 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13517239 |
Total Bases | 81.1 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTTTCG | 13098853 | 96.90479690416069 | No Hit |
GTTTTG | 170926 | 1.2645037940070454 | No Hit |
GTTTCC | 28118 | 0.20801585294156597 | No Hit |
GATTCG | 23895 | 0.17677426580975597 | No Hit |
GCTTCG | 20402 | 0.1509331898326278 | No Hit |
GTTTAG | 19497 | 0.14423803559291953 | No Hit |
GTTTCA | 18547 | 0.1372099731313473 | No Hit |
GTTTCT | 18403 | 0.13614466682138268 | No Hit |
GGTTCG | 18150 | 0.1342729828184587 | No Hit |
GTTCCG | 15546 | 0.11500869371326497 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)