Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004828853 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12279310 |
Total Bases | 73.6 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CAGATC | 12055946 | 98.18097270937862 | No Hit |
CAGCTC | 32774 | 0.26690424787712014 | No Hit |
CAGTTC | 25337 | 0.20633895552763143 | No Hit |
CAGATA | 22927 | 0.18671244556900998 | No Hit |
CAGATT | 22709 | 0.18493710151466167 | No Hit |
TAGATC | 19687 | 0.16032659815575956 | No Hit |
AAGATC | 12492 | 0.10173210058219884 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)