FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004829054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004829054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7308881
Sequences flagged as poor quality0
Sequence length6
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCT719557498.44973532884173No Hit
CTTCCT138200.1890850323052188No Hit
ATTCTT129210.17678492781589958No Hit
ATTCCC114050.15604303859920554No Hit
ATTTCT102230.1398709323629705No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)