EGAF00004829273 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004829273
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11635307
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCA	33885	0.2912256634053575	No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGG	26960	0.2317085402215859	No Hit
CTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTA	25888	0.2224952036074338	No Hit
CCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAG	23605	0.2028738906502424	No Hit
CTCTTATTCTCATGGTAGGCTGAGATGCTTTTAAATGTGATGTTATAAGC	20236	0.17391891765296782	No Hit
CTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGC	18775	0.16136230870401616	No Hit
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCT	18185	0.15629153575406304	No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG	17099	0.1469578757139799	No Hit
CTCATGGTAGGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCA	17090	0.146880524940167	No Hit
CTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTACAA	16356	0.14057213960920842	No Hit
CGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTC	16353	0.14054635601793747	No Hit
CAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGG	13845	0.11899127371542495	No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG	13720	0.1179169574124688	No Hit
CCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGA	12743	0.10952010118856341	No Hit
CTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTTGC	12702	0.10916772544119378	No Hit
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT	12594	0.10823951615543964	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTCGAG	1510	39.31991	5
CCCGTCG	6270	37.995274	1
TGTTACG	1930	37.162	3
ACGACTT	5145	36.7648	1
TTACGAC	2025	36.35684	5
GTATCGA	3975	35.011436	4
GTTACGA	2050	34.986664	4
CCCGTAT	4140	34.295963	1
TATCGAA	4340	32.614143	5
CGCGTAA	10420	32.556625	1
GCGTAAC	10915	32.28937	2
GTCGAGG	1920	31.170856	6
TACGACT	2385	31.068167	6
CGTAACT	11555	30.62427	3
ACCGCGT	470	30.31816	6
CGTACGC	3785	30.2434	5
CCGTACG	3860	29.655767	4
TCCGTAC	4095	28.069902	3
GTACGCC	4115	27.818047	6
TACGCCA	4200	27.481245	7