EGAF00004829283 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004829283
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10417500
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTA	41638	0.39969282457403404	No Hit
CTCTTATTCTCATGGTAGGCTGAGATGCTTTTAAATGTGATGTTATAAGC	28089	0.26963282937365013	No Hit
CTCATGGTAGGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCA	23456	0.22515958723302137	No Hit
CTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTACAA	20991	0.2014974802015839	No Hit
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT	19619	0.18832733381329494	No Hit
CCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTACA	18333	0.1759827213822894	No Hit
CTCCTTATCGTCAGCCTTGCAGCACTTCTCTACAAAAGCTGCGAAATCAT	17903	0.17185505159587233	No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG	15235	0.1462443004559635	No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG	14947	0.1434797216222702	No Hit
CCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTC	14520	0.13938084953203744	No Hit
CTTATCGTCAGCCTTGCAGCACTTCTCTACAAAAGCTGCGAAATCATCCA	13757	0.13205663546916246	No Hit
CTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTTGC	13635	0.13088552915766738	No Hit
CTCTTTTGTTGCCTTGGGCTTGTGTTTCACAAGCTCAACAAGTGCAGTTT	13514	0.12972402207823375	No Hit
CCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAG	12013	0.11531557475401967	No Hit
CTCTTTTGTTGCCTTGGGCTTGTGTTTCACGAGCTCAACAAGTGCAGTTT	11868	0.11392368610511158	No Hit
CTTCATTTTCTTTCTCTTATTCTCATGGTAGGCTGAGATGCTTTTAAATG	11559	0.11095752339812814	No Hit
CAGGGTGTTGGCTTTACACCAACGAAAAAGAAAAACAGATGAATAAGCTT	10539	0.10116630669546435	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCGA	3970	40.08028	4
CCCGTAT	4175	39.96899	1
CCCGTCG	3405	38.92596	1
TATCGAA	4265	37.864857	5
GTTACGA	1250	35.338604	4
TTACGAC	1340	32.610653	5
ACGACTT	3380	31.878904	1
CGTATCG	5260	31.876118	3
CCGTATC	5545	30.580397	2
TGTTACG	1525	28.96607	3
TACGACT	1495	28.594187	6
ATCGAAG	6560	27.80378	6
GCACCCG	3705	27.306614	8
CGCGTAA	3420	24.814499	1
CACCCGG	4315	23.44635	9
GCGTAAC	3715	23.14175	2
GCGCGTT	2405	23.008448	90-91
TCGAAGG	7915	22.92392	7
CGACTTT	5730	22.298422	2
CGCGTAG	355	21.48836	1