FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830114

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830114
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12343155
Sequences flagged as poor quality0
Sequence length68-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC352800.08.776457120
AGTGTAG490400.08.736669120
TAGATCT359700.08.541371120
ATCTCGG332400.08.358302120
AGAGTGT570700.08.253913120
GTGTAGA476400.08.111706120
TCTCGGT304500.08.020569120
GATCTCG353100.07.970273120
GAGTGTA526950.07.914317120
AAGAGTG631550.07.6011677120
TCGGTGG270500.07.431485120
GTGGTCG207650.07.3978605120
TGGTCGC190600.07.39741118-119
TGTAGAT502800.07.3754964120
CGGTGGT271300.07.321099120
GTAGATC481850.07.297663120
GGTCGCC201150.07.2491035120
CTCGGTG286100.07.089195120
TAGGGAA883800.06.9729176120
GGGAAAG856900.06.813665120
Produced by FastQC (version 0.11.5)