FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830118

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830118
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15158875
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG86350.09.1024120
TAGATCT396950.08.449343120
ATCTCGG357050.08.43571120
CTCGGTG313600.08.380019120
GTGTAGA530350.08.100231120
GTGGTCG241800.08.064436120
AGATCTC392850.08.048794120
GAGTGTA579300.07.9336343120
GTAGATC531900.07.9299836120
AGTGTAG538800.07.9286523120
TCTCGGT327400.07.7702346120
GATCTCG382300.07.658831120
TCGGTGG310800.07.5288835120
AGAGTGT629900.07.5249295120
AAGAGTG695950.07.345282120
GGTGGTC264900.07.2932463120
GTAGGGA991500.07.0559053120
TGTAGGG1050400.07.0201135120
TAGGGAA945700.06.883722120
TGTAGAT567900.06.803948120
Produced by FastQC (version 0.11.5)