FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15364065
Sequences flagged as poor quality0
Sequence length55-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG124300.012.357075120
AAAAAAA907350.010.930623120
TGGTCGC649000.09.633185120
GTGGTCG707000.09.089017120
GGTGGTC771500.08.912418120
TCATTAA315750.08.683998120
CGTATCA399600.08.558473120
TCGGTGG908600.08.525118120
CTCGGTG986500.08.374978120
CCGTATC474500.08.370832120
GGTCGCC631650.08.358975120
GTCGCCG649100.08.254423120
GTATCAT406700.08.246781120
GCCGTAT494050.08.209613120
TCTCGGG50150.08.135511120
CGCCGTA529750.07.9168615120
TCTCGGT1031200.07.831573120
CGGTGGT862800.07.768084118-119
ATCTCGG1114250.07.6947846120
ATCATTA364050.07.564819120
Produced by FastQC (version 0.11.5)