FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830126

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830126
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12061697
Sequences flagged as poor quality0
Sequence length77-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC436500.09.992091120
TGGTCGC209600.09.903554120
CTCGGTG339200.09.692391120
GGTGGTC254000.09.684035120
GTGGTCG235550.09.653001120
TAGATCT456850.09.652059120
TCGGTGG312650.09.556022120
TCTCGGT365300.09.361197120
GATCTCG423800.09.187345120
GGTCGCC212000.09.083963120
ATCTCGG406900.08.979163120
GAGTGTA686500.08.93134120
AGTGTAG633500.08.9209385120
GCGTCGG81950.08.638519120
GTGTAGA611700.08.630788120
AGAGTGT750700.08.599082120
GTAGATC610200.08.465199120
TGTAGAT631400.08.390008120
CGGTGGT299250.07.959537118-119
AAGAGTG819850.07.95429120
Produced by FastQC (version 0.11.5)