FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15712663
Sequences flagged as poor quality0
Sequence length79-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1381650.012.539792120
GCGTCGG95450.012.507437120
TCATTAA451000.08.353612120
CGCCGTA721050.08.311728120
TGGTCGC885300.08.280792120
CGTATCA591950.08.249556120
GGTCGCC844900.08.229422120
GTATCAT572850.08.021933120
GGTGGTC1026700.07.911635120
GCCGTAT701550.07.867203120
GTCGCCG839750.07.844107120
GTGGTCG951150.07.688575120
ATCATTA510000.07.6695275120
CTCGGTG1246100.07.6403847120
TCGCCGT800900.07.535479120
CATTAAA447800.07.5157084120
TATCATT616550.07.5020037120
TCGGTGG1184600.07.4192120
CGGTGGT1118000.07.4157896120
CCGTATC680200.07.3115435120
Produced by FastQC (version 0.11.5)