FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13225372
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA836500.010.991569120
GCGTCGG80200.010.775935120
TGGTCGC534700.09.013059120
CGTATCA345300.08.812076120
CGCCGTA431300.08.78045120
GCCGTAT416650.08.585028120
CCGTATC396850.08.499175120
GTGGTCG580600.08.4349120
GGTCGCC506850.08.418932120
CGGTGGT702900.08.290725120
GTATCAT359450.08.214733120
GGTGGTC633850.08.123957120
GTCGCCG511150.08.007608120
TCGGTGG742850.07.998359120
TCTCGGT846600.07.847588120
CTCGGTG789500.07.829823120
ATCTCGG901550.07.6888075120
GATCTCG952000.07.4137373120
TCGCCGT503300.07.3932276118-119
ATCATTA333250.07.3838105120
Produced by FastQC (version 0.11.5)