FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11623893
Sequences flagged as poor quality0
Sequence length73-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC201300.09.656695120
GATCTCG375000.09.26349120
AGATCTC385500.09.2135120
TCTCGGT323150.08.688985120
TAGATCT405250.08.65344118-119
ATCTCGG354950.08.552847120
CGGTGGT279050.08.449634120
CTCGGTG304250.08.361084120
GTGGTCG218000.08.270187118-119
TCGGTGG286500.08.2508545120
GGTGGTC232850.08.116366120
GTGTAGA536750.08.003285120
AGTGTAG548800.07.9587455120
GGTCGCC200550.07.9277606120
GTAGATC536800.07.9243026120
AAGAGTG701100.07.744546120
AGAGTGT633750.07.7439523120
GAGTGTA589650.07.6108756120
GTCGCCG229450.07.4260454120
TGTAGAT564250.07.166641120
Produced by FastQC (version 0.11.5)