FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13778841
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA959000.09.136198120
TGGTCGC491950.08.5747175120
CGTATCA310850.08.362875120
GCGTCGG95950.08.153069120
GGTCGCC488300.08.096576120
TCGGTGG666700.07.834513120
GTGGTCG537750.07.833221120
CGCCGTA421400.07.8111606120
CGGTGGT644750.07.6065726120
GCCGTAT392450.07.5746984120
CCGTATC378650.07.548808120
GGTGGTC576400.07.5480895120
CTCGGTG716700.07.4894547120
GTCGCCG512400.07.422166120
TCTCGGT742050.07.379568120
GATCTCG862950.07.37773120
TCGCCGT489000.07.2727957120
AGATCTC873050.07.216561120
ATCTCGG793800.07.1031547120
TAGATCT910450.07.0589137120
Produced by FastQC (version 0.11.5)