FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13579813
Sequences flagged as poor quality0
Sequence length63-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT334300.08.256058120
AGTGTAG437100.07.54976120
GTGTAGA436250.07.5369625120
GGTGGTC229150.07.4623604120
AGATCTC338750.07.368265120
AGAGTGT502500.07.2955217120
GTAGATC428350.07.255748120
GAGTGTA463800.07.141009120
TCTCGGT291150.07.0273046120
CTCGGTG293900.07.0227966120
TGGTCGC194100.07.017001120
TGTAGAT476950.06.8434844120
ATCTCGG313600.06.7729588120
GTGTAGG882550.06.750892120
TGTAGGG820750.06.718245120
TCGGTGG268450.06.6828084120
GATCTCG349450.06.593218120
TAGGGAA743850.06.5819716120
CGTGTAG929300.06.579145120
GTAGGGA775050.06.4563575120
Produced by FastQC (version 0.11.5)