FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13232673
Sequences flagged as poor quality0
Sequence length51-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG84650.09.213268120
TGGTCGC337300.08.590691120
TAGATCT682050.08.558427120
GTGGTCG363100.08.525518120
GGTCGCC326900.08.515308120
CTCGGTG517900.08.386678120
CGGTGGT440800.08.329275120
TCGGTGG465350.08.2637205120
AGATCTC648300.07.9212747120
GTAGATC844150.07.881506120
ATCTCGG600500.07.7925377120
GGTGGTC392250.07.76959120
GTGTAGA862000.07.641742120
TCTCGGT558000.07.6334605120
GATCTCG623900.07.5868125120
AGTGTAG898200.07.560851120
GAGTGTA960800.07.461605120
AGAGTGT1034550.07.3936014120
AAAAAAA884200.07.1106296120
TGTAGAT885300.07.0340295120
Produced by FastQC (version 0.11.5)