FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14661364
Sequences flagged as poor quality0
Sequence length64-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT371150.08.68024120
TGGTCGC198650.08.577025120
TCTCGGT313850.08.487265120
GAGTGTA539500.08.295724120
GGTGGTC243300.08.235905120
GTGTAGA498800.08.226907120
AGATCTC377400.08.107281120
CTCGGTG300400.08.048446120
AGAGTGT589650.08.027672120
GATCTCG385400.08.016826120
GTAGATC499450.08.011996120
GGTCGCC212750.07.9803834120
ATCTCGG362000.07.8721247120
GTGGTCG221800.07.8711534120
AGTGTAG501250.07.8036923120
AAGAGTG653300.07.6220593120
TCGGTGG293900.07.5732317120
CGGTGGT296150.06.9282136120
TGTAGGG991300.06.923534120
TGTAGAT524150.06.78181118-119
Produced by FastQC (version 0.11.5)