FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15478267
Sequences flagged as poor quality0
Sequence length53-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC362550.08.290982120
GGTCGCC353200.08.153737120
TCTCGGT542850.08.123508120
GTGGTCG387000.08.108245120
TCGGTGG489850.07.9490957120
CGTATCA243850.07.898023120
GGTGGTC419700.07.862486120
GCCGTAT302900.07.626014120
AGATCTC643150.07.612268120
TAGATCT663500.07.60486120
ATCTCGG588150.07.559033120
CTCGGTG524800.07.442577120
CGGTGGT488650.07.4160933120
AGTGTAG863700.07.3911977120
GATCTCG632500.07.3610086120
AGAGTGT987750.07.1857786120
GAGTGTA918400.07.0489707120
TGTAGAT874500.07.011763120
GTGTAGA840650.06.9729333120
CCGTATC285200.06.963292120
Produced by FastQC (version 0.11.5)