FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15247157
Sequences flagged as poor quality0
Sequence length53-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA924400.09.087127120
GTGGTCG502800.08.639763120
GGTGGTC547700.08.249179120
GGTCGCC448800.08.155216120
CGCCGTA407300.08.013883120
CTCGGTG687150.07.96346120
GATCTCG817100.07.923275120
TGGTCGC461200.07.9229426120
TCGGTGG651850.07.8516307120
GCGTCGG83650.07.818421120
TAGATCT897150.07.7379656120
GCCGTAT406200.07.651531120
ATCTCGG780050.07.545796120
AGATCTC850350.07.514679120
CGGTGGT627350.07.498332120
TCTCGGT731900.07.4027743120
CGTATCA337450.07.3967757120
GTCGCCG463000.07.2701120
GAGTGTA1238000.07.11482120
AGTGTAG1162250.06.9951696120
Produced by FastQC (version 0.11.5)