FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14514092
Sequences flagged as poor quality0
Sequence length126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT390850.09.129009120
AGTGTAG540500.09.09086120
AGATCTC383150.08.936211120
AGAGTGT629500.08.7120905120
GATCTCG390650.08.626258120
GTGTAGA522350.08.440765120
GAGTGTA576450.08.20088120
AAGAGTG692450.08.162977120
ATCTCGG360750.07.94254120
GTAGATC551400.07.9416018120
TCGGTGG301850.07.8406563120
TCTCGGT326450.07.746629120
GTGGTCG240400.07.496079120
GTAGGGA1048850.07.473852120
TAGGGAA993650.07.4235616120
CTCGGTG323650.07.3867745120
GGTGGTC262600.07.365606120
TGTAGGG1119750.07.3439507120
GGGAAAG960150.07.200847120
TGTAGAT559100.07.123139120
Produced by FastQC (version 0.11.5)