FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7057195
Sequences flagged as poor quality0
Sequence length53-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA116050.08.73712120
TCGGTGG225150.08.60711120
GGTGGTC194550.08.449793120
GTGGTCG175400.08.311959120
TGGTCGC158750.08.201112120
GGTCGCC154300.08.0488120
CTCGGTG238850.07.962707120
CCGTATC139200.07.671981120
TCTCGGT250000.07.6195703118-119
CGCCGTA145000.07.6133633120
GCCGTAT138850.07.453666118-119
GTCGCCG167650.07.4436593120
TAGATCT309750.07.224774120
CGGTGGT220450.07.1304655118-119
GTGTAGA387900.07.099367120
GTAGATC387050.07.0684557120
ATCTCGG272750.06.9950223120
GAGTGTA421550.06.9596357120
AGATCTC299550.06.849889120
GATCTCG286050.06.711782116-117
Produced by FastQC (version 0.11.5)