FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14526104
Sequences flagged as poor quality0
Sequence length65-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCC186200.09.182755120
GCGTCGG62200.09.066618120
GAGTGTA559950.08.560623120
AGATCTC375800.08.477066120
TAGATCT389000.08.46702120
GGTGGTC226200.08.142422120
TCTCGGT315650.08.077761120
TGGTCGC186850.08.059135118-119
GATCTCG357150.08.029437120
CGGTGGT268850.08.011103120
TCGGTGG269350.07.973957120
AAGAGTG668350.07.971074120
AGAGTGT606100.07.9681864120
CTCGGTG302550.07.911951120
TAGGGAA951050.07.9041567120
ATCTCGG338650.07.848027120
GTGTAGA515950.07.790674120
GTGGTCG201700.07.7781024118-119
AGTGTAG520850.07.665549118-119
CGTGTAG1205250.07.5263166120
Produced by FastQC (version 0.11.5)