FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14983814
Sequences flagged as poor quality0
Sequence length53-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC247900.09.078401120
TCGGTGG352400.08.862285120
GGTGGTC292350.08.809574120
TAGATCT502200.08.567292120
GTGGTCG268500.08.449117120
AGATCTC482550.08.330065120
CGGTGGT332800.08.317423120
GATCTCG478750.08.207647120
ATCTCGG439950.08.151868120
GTAGATC663300.07.88359120
CTCGGTG382050.07.85204118-119
AGTGTAG669050.07.833824120
TCTCGGT395600.07.8032465120
GTGTAGA654700.07.6838374120
GAGTGTA712100.07.630641120
AGAGTGT769000.07.590312120
GGTCGCC248500.07.3129873120
GCGTCGG84300.07.2095485120
TAGGGAA1151650.07.132247120
AAGAGTG843600.07.026093120
Produced by FastQC (version 0.11.5)