FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13087804
Sequences flagged as poor quality0
Sequence length58-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC280150.09.850597120
GGTCGCC220850.09.616149120
GTGGTCG247450.09.503727120
TGGTCGC227150.09.455089120
ATCTCGG423900.09.326471120
AGATCTC488750.09.095504120
TCGGTGG340100.08.9609165120
TCTCGGT387600.08.837872120
TAGATCT505600.08.827977120
CGGTGGT325750.08.766331120
CTCGGTG367300.08.558658120
GATCTCG464750.08.506704120
GTGTAGA655100.08.013012120
AGTGTAG678350.07.879873120
CGCCGTA204650.07.797676120
GAGTGTA725300.07.7585483120
GTAGATC668900.07.6683207120
AGAGTGT787550.07.579496120
GCGTCGG64150.07.575018120
AAGAGTG857650.07.428648120
Produced by FastQC (version 0.11.5)