FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15799731
Sequences flagged as poor quality0
Sequence length50-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1205100.011.912535120
GCGTCGG95400.010.820471120
CGTATCA540000.010.258267120
TGGTCGC915950.09.972613120
GTCGCCG846600.09.690726120
GCCGTAT667600.09.6460495120
CGCCGTA720250.09.590874120
CCGTATC627100.09.551241120
GGTCGCC855600.09.511631120
GTATCAT538250.09.343855120
GTGGTCG996750.09.06786120
TCATTAA422400.08.8375635120
GGTGGTC1078300.08.766113120
ATCATTA489600.08.678765120
TCGCCGT813250.08.604795120
CGGTGGT1193100.08.56148120
TATCATT588350.08.425785120
TCGGTGG1275400.08.399587120
CTCGGTG1373950.08.299439120
CATTAAA437750.07.9107156120
Produced by FastQC (version 0.11.5)