FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14727370
Sequences flagged as poor quality0
Sequence length55-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT394150.09.25526120
TCGGTGG292500.09.251183120
GGTGGTC228050.08.919001120
AGTGTAG541200.08.813652120
ATCTCGG379850.08.78232120
CTCGGTG312250.08.7429120
GAGTGTA579850.08.702157120
AGATCTC389600.08.639538120
TGGTCGC190400.08.602849120
GTGTAGA531800.08.42789120
TCTCGGT327900.08.398812120
GATCTCG411650.08.3370905120
GTAGATC533550.08.209077120
GTGGTCG219250.08.07289120
AGAGTGT641550.08.061639120
AAGAGTG704200.08.043083120
GGTCGCC203850.08.005801120
TGTAGAT567650.07.8427763120
TAGGGAA984850.07.4873543120
TGTAGGG1105400.07.403575120
Produced by FastQC (version 0.11.5)