FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13264247
Sequences flagged as poor quality0
Sequence length51-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTCGG423900.07.629138120
TAGATCT469600.07.5638638120
TGGTCGC264150.07.473007120
AGATCTC466850.07.4413433120
GGTCGCC270300.07.4361625120
GGTGGTC317250.07.413692120
GATCTCG463350.07.3810105120
TCGGTGG370650.07.349232120
GAGTGTA644550.07.316714120
CTCGGTG391750.07.1525016120
AGTGTAG607350.07.122727120
TCTCGGT393400.07.069123118-119
GTGGTCG287400.07.056349120
AGAGTGT691450.06.976625120
CGCCGTA252450.06.7973676120
GTAGATC619700.06.748409120
GTGTAGA602650.06.700389120
CGGTGGT370350.06.6099463120
TGTAGAT629800.06.5449176120
AAGAGTG754900.06.517402120
Produced by FastQC (version 0.11.5)