FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13142460
Sequences flagged as poor quality0
Sequence length54-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC7650.020.3914471
GCGTCGG76350.011.316086120
CCCCCCG9502.5602276E-810.1049121
GGTCGCC476500.09.745874120
TGGTCGC502100.09.679158120
CGTATCA303900.09.456874120
GTGGTCG551950.09.446323120
TCGGTGG714150.09.174364120
GCCGTAT380050.09.093363120
CCGTATC356750.09.064995120
GGTGGTC605650.09.034744120
CGCCGTA396400.08.990743120
GTCGCCG483000.08.981191120
GTATCAT326450.08.877143120
AAAAAAA778700.08.860748120
CGGTGGT669800.08.599414120
TCGCCGT457500.08.5506525120
TCTCGGT816350.08.238953120
CTCGGTG768400.08.0581455120
GGGGGGG8254.413339E-47.99972251
Produced by FastQC (version 0.11.5)