FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10635964
Sequences flagged as poor quality0
Sequence length53-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC263200.010.51183120
TCGGTGG399650.010.0313635120
GTGGTCG299750.010.030945120
GGTGGTC326850.09.896999120
ATCTCGG506050.09.736728120
TCTCGGT461400.09.443269120
AGATCTC552100.09.392026120
TAGATCT584250.09.337453120
GATCTCG534600.09.216743120
CGGTGGT382500.08.959174120
GGTCGCC269100.08.876315120
CTCGGTG442550.08.869083120
CGTATCA160950.08.762745120
GCCGTAT231450.08.349529120
GTAGATC726250.08.090211120
GTGTAGA761650.08.03726120
TGTAGAT748450.07.954487120
GCGTCGG91400.07.9451566120
AGTGTAG791400.07.8412943120
CGCCGTA244200.07.716978120
Produced by FastQC (version 0.11.5)