FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12419678
Sequences flagged as poor quality0
Sequence length51-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1240900.015.413532120
CATTAAA418200.09.224601120
GCCGTAT683550.09.163278120
CGCCGTA723450.09.03938120
TCATTAA442000.09.026513120
CGTATCA569800.08.655059120
ATCATTA498950.08.465181120
CCGTATC645950.08.396343120
GTGGTCG1025250.08.373953120
TATCATT568800.08.364389120
TCGCCGT829350.08.290246120
GTATCAT550800.08.158466120
GTCGCCG894000.08.02628120
GGTGGTC1089450.07.957584120
GGTCGCC901800.07.923593120
TGGTCGC946200.07.9195437120
CGGTGGT1196950.07.91456120
TCGGTGG1270250.07.911271120
CTCGGTG1340350.07.748176120
ATTAAAA453300.07.385317120
Produced by FastQC (version 0.11.5)