FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13619889
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTCGG408400.08.168439120
AGATCTC444300.08.0080805120
GCGTCGG82450.07.786515120
GTGGTCG264450.07.782167120
GGTGGTC295800.07.748456120
CTCGGTG359800.07.687582120
TGGTCGC241700.07.459612118-119
TAGATCT451400.07.396939118-119
TCGGTGG344250.07.3202405120
TCTCGGT374600.07.2397013120
GATCTCG440150.07.1566305120
GGTCGCC252550.07.0322504120
AGTGTAG583300.07.0049515120
CGGTGGT342150.06.979375120
GTGTAGA571900.06.9347587120
GAGTGTA621300.06.9145145120
AGAGTGT669500.06.8827286120
GTAGATC567150.06.876468120
GCCGTAT241900.06.820981120
AAGAGTG730650.06.758346120
Produced by FastQC (version 0.11.5)