FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12836424
Sequences flagged as poor quality0
Sequence length60-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG112400.012.170029120
GTGGTCG442400.09.533739120
TGGTCGC407250.08.971793120
CGGTGGT528400.08.776871120
TCTCGGT634050.08.752685120
CTCGGTG603750.08.655339120
GGTCGCC405650.08.548687120
GATCTCG775500.08.510086120
CGCCGTA321400.08.47487120
ATCTCGG694550.08.430811120
GGTGGTC469300.08.399199118-119
CGTATCA245650.08.3283825120
AGATCTC794550.08.306049120
TAGATCT825000.08.210376120
AAAAAAA734050.08.12426120
TCGGTGG563650.08.11089120
AGTGTAG1079050.07.8452816120
GTGTAGA1042100.07.824077120
GCCGTAT301150.07.709943120
GAGTGTA1145350.07.6163907120
Produced by FastQC (version 0.11.5)