FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12740060
Sequences flagged as poor quality0
Sequence length56-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC174000.010.344777120
TCTCGGT298150.010.062001120
CTCGGTG271850.010.042254120
GTGGTCG190100.010.036774120
AGATCTC359400.09.76623120
TAGATCT378800.09.662044120
GATCTCG338750.09.564529120
TCGGTGG266850.09.510915120
GGTCGCC166550.09.330486120
ATCTCGG328550.09.313606120
GTAGATC519500.09.043267120
GGTGGTC213150.08.810655118-119
AGAGTGT646400.08.780898120
AGTGTAG551000.08.667834120
GTCGCCG154900.08.56032120
GTGTAGA541000.08.31789120
GAGTGTA589300.08.287759120
TGTAGAT570400.07.9627943120
CGCCGTA141950.07.8196173120
CGGTGGT257050.07.656061120
Produced by FastQC (version 0.11.5)