FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13637691
Sequences flagged as poor quality0
Sequence length57-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1276150.012.002167120
GCGTCGG70850.011.042746120
CGTATCA501250.09.449176120
GGTCGCC754650.09.051569120
GTCGCCG741000.08.966532120
CCGTATC564600.08.836642120
CGCCGTA622950.08.810798120
GCCGTAT589050.08.674194120
GTGGTCG870100.08.645985120
GTATCAT512950.08.635279120
TGGTCGC803650.08.552099120
CCTAGGA6400.003251878.4448121
TCGCCGT703250.08.386678120
CGGTGGT1037350.08.325306120
TCGGTGG1100450.08.301852120
GGTGGTC940900.08.136118120
ATCATTA481900.07.992758120
TCATTAA420600.07.941404120
CCTTCAT136200.07.93638751
CTCGGTG1178550.07.792559120
Produced by FastQC (version 0.11.5)