FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14282825
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1407550.014.399031120
CGTATCA661800.010.147633120
CCGTATC758950.09.862671120
TCATTAA518400.09.672515120
GTATCAT646400.09.589493120
GCGTCGG109000.09.542408120
ATCATTA579150.09.031638120
GCCGTAT829800.08.91914120
CATTAAA516800.08.841571120
TGGTCGC1111650.08.691328120
CCCCCCG7752.2488568E-48.5160661
TATCATT671550.08.478323120
GGTCGCC1050900.08.438572120
CGCCGTA891950.08.425735120
TCTCGGG39800.08.308411120
GTGGTCG1202500.08.149686120
GTCGCCG1052900.07.965727120
GGTGGTC1288850.07.8789120
TCGCCGT1006050.07.852612120
CGGTGGT1400150.07.4372377120
Produced by FastQC (version 0.11.5)