FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830306

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830306
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12675686
Sequences flagged as poor quality0
Sequence length64-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC327350.08.558657120
TAGATCT608100.08.454868120
ATCTCGG527750.08.32116120
GGTGGTC401800.08.301678120
GTGGTCG381600.08.238041120
CTCGGTG484850.08.1912775120
AGTGTAG801850.08.1327505120
AGATCTC590700.08.125013120
TCTCGGT481800.08.081258120
GATCTCG588650.08.061584120
GAGTGTA860300.07.831247120
GGTCGCC330000.07.817278120
AAAAAAA547950.07.751636120
GTGTAGA775550.07.6349893120
TCGGTGG467950.07.410192120
TGTAGAT789200.07.3508987120
CGGTGGT447950.07.3198023118-119
GTAGATC781900.07.319783120
AGAGTGT924100.07.284084120
GCCGTAT258900.07.2761120
Produced by FastQC (version 0.11.5)