FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13168659
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1848600.015.171837120
GCGTCGG77550.012.687076120
TCATTAA624050.09.363519120
GTATCAT793900.09.090742120
CGTATCA816500.09.081588120
ATCATTA699750.08.856394120
CATTAAA605850.08.723892120
CCGTATC915350.08.539978120
GCCGTAT960750.08.336244120
TATCATT810150.08.271556120
CGCCGTA1007550.08.246746120
TTAAAAA650350.07.8963447120
TCTCGGG34850.07.7465663120
TCGCCGT1094850.07.742604120
GTCGCCG1164200.07.6936374120
GGTCGCC1211700.07.5306697120
ATTAAAA683800.07.3872447120
TGGTCGC1276450.07.2755637120
GTGGTCG1362000.07.109285120
GGTGGTC1449100.06.8475723120
Produced by FastQC (version 0.11.5)