FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14963827
Sequences flagged as poor quality0
Sequence length56-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT304550.09.515462120
GAGTGTA459500.09.257677120
AGAGTGT506650.08.964563120
AGTGTAG425650.08.950812120
CTCGGTG242050.08.898785120
AGATCTC306550.08.631348120
AAGAGTG574050.08.5495825120
GATCTCG307350.08.29654120
GTGTAGA422850.08.215492120
GTGGTCG176850.08.21016120
GTAGATC431100.08.113941120
ATCTCGG276300.07.9911313120
TCTCGGT252250.07.968103120
TGGTCGC160750.07.800755120
TGTAGAT461100.07.6641064120
TGTAGGG906150.07.5813537120
TAGGGAA820350.07.5185704120
GGGAAAG827500.07.410103120
GTAGGGA851550.07.3699217120
GTGTAGG982500.07.328077120
Produced by FastQC (version 0.11.5)