FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15984609
Sequences flagged as poor quality0
Sequence length63-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54200.09.077781120
GGTCGCC377950.08.842721120
GTCGCCG366350.08.418448120
AAAAAAA802150.08.347832120
CGCCGTA314650.08.333335120
GGTGGTC461450.08.32186120
TGGTCGC396900.08.223996120
ATCTCGG668350.08.052924120
CGGTGGT526100.08.017743120
TAGATCT751650.07.998659120
CTCGGTG579750.07.917458120
TCGCCGT378200.07.8691034120
TCGGTGG551200.07.848581120
GATCTCG672700.07.8402977120
GTGGTCG424800.07.810983120
CCGTATC313800.07.724912120
GCCGTAT324550.07.616943120
AGATCTC713250.07.5712194120
TCTCGGT639250.07.1992908120
CGTATCA286300.07.062747120
Produced by FastQC (version 0.11.5)